Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher.
Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?
Some links on this page may take you to non-federal websites. Their policies may differ from this site.
-
Polyploidy and subsequent post-polyploid diploidization (PPD) are key drivers of plant genome evolution, yet their contributions to evolutionary success remain debated. Here, we analyze the Malvaceae family as an exemplary system for elucidating the evolutionary role of polyploidy and PPD in angiosperms, leveraging 11 high-quality chromosome-scale genomes from all nine subfamilies, including newly sequenced, near telomere-to-telomere assemblies from four of these subfamilies. Our findings reveal a complex reticulate paleoallopolyploidy history early in the diversification of the Malvadendrina clade, characterized by multiple rounds of species radiation punctuated by ancient allotetraploidization (Mal-β) and allodecaploidization (Mal-α) events around the Cretaceous–Paleogene (K–Pg) boundary. We further reconstruct the evolutionary dynamics of PPD and find a strong correlation between dysploidy rate and taxonomic richness of the paleopolyploid subfamilies (R^2 ≥ 0.90, P < 1e-4), supporting the “polyploidy for survival and PPD for success” hypothesis. Overall, our study provides a comprehensive reconstruction of the evolutionary history of the Malvaceae and underscores the crucial role of polyploidy–dysploidy waves in shaping plant biodiversity.more » « lessFree, publicly-accessible full text available August 12, 2026
-
Free, publicly-accessible full text available January 4, 2026
-
Conventional directed evolution methods offer the ability to select bioreceptors with high binding affinity for a specific target in terms of thermodynamic properties. However, there is a lack of analogous approaches for kinetic selection, which could yield affinity reagents that exhibit slow off-rates and thus remain tightly bound to targets for extended periods. Here, we describe an in vitro directed evolution methodology that uses the nuclease flap endonuclease 1 to achieve the efficient discovery of aptamers that have slow dissociation rates. Our nuclease-assisted selection strategy can yield specific aptamers for both small molecules and proteins with off-rates that are an order of magnitude slower relative to those obtained with conventional selection methods while still retaining excellent overall target affinity in terms of thermodynamics. This new methodology provides a generalizable approach for generating slow off-rate aptamers for diverse targets, which could, in turn, prove valuable for applications including molecular devices, bioimaging, and therapy.more » « less
-
Free, publicly-accessible full text available December 7, 2025
-
AI's widespread integration has led to neural networks (NN) deployment on edge and similar limited-resource platforms for safety-critical scenarios. Yet, NN's fragility raises concerns about reliable inference. Moreover, constrained platforms demand compact networks. This study introduces VeriCompress, a tool that automates the search and training of compressed models with robustness guarantees. These models are well-suited for safety-critical applications and adhere to predefined architecture and size limitations, making them deployable on resource-restricted platforms. The method trains models 2-3 times faster than the state-of-the-art approaches, surpassing them by average accuracy and robustness gains of 15.1 and 9.8 percentage points, respectively. When deployed on a resource-restricted generic platform, these models require 5-8 times less memory and 2-4 times less inference time than models used in verified robustness literature. Our comprehensive evaluation across various model architectures and datasets, including MNIST, CIFAR, SVHN, and a relevant pedestrian detection dataset, showcases VeriCompress's capacity to identify compressed verified robust models with reduced computation overhead compared to current standards. This underscores its potential as a valuable tool for end users, such as developers of safety-critical applications on edge or Internet of Things platforms, empowering them to create suitable models for safety-critical, resource-constrained platforms in their respective domains.more » « less
-
Stress impacts our physical and mental health as well as our social life. A passive and contactless indoor stress monitoring system can unlock numerous important applications such as workplace productivity assessment, smart homes, and personalized mental health monitoring. While the thermal signatures from a user's body captured by a thermal camera can provide important information about the fight-flight response of the sympathetic and parasympathetic nervous system, relying solely on thermal imaging for training a stress prediction model often lead to overfitting and consequently a suboptimal performance. This paper addresses this challenge by introducing ThermaStrain, a novel co-teaching framework that achieves high-stress prediction performance by transferring knowledge from the wearable modality to the contactless thermal modality. During training, ThermaStrain incorporates a wearable electrodermal activity (EDA) sensor to generate stress-indicative representations from thermal videos, emulating stress-indicative representations from a wearable EDA sensor. During testing, only thermal sensing is used, and stress-indicative patterns from thermal data and emulated EDA representations are extracted to improve stress assessment. The study collected a comprehensive dataset with thermal video and EDA data under various stress conditions and distances. ThermaStrain achieves an F1 score of 0.8293 in binary stress classification, outperforming the thermal-only baseline approach by over 9%. Extensive evaluations highlight ThermaStrain's effectiveness in recognizing stress-indicative attributes, its adaptability across distances and stress scenarios, real-time executability on edge platforms, its applicability to multi-individual sensing, ability to function on limited visibility and unfamiliar conditions, and the advantages of its co-teaching approach. These evaluations validate ThermaStrain's fidelity and its potential for enhancing stress assessment.more » « less
An official website of the United States government
